Information for 21-AAACAAAGAA (Motif 28)

C T G A C G T A T C G A A T G C C G T A G T C A C G T A T A C G C G T A C G T A
Reverse Opposite:
A C G T A C G T A T G C C G A T A C G T A C G T A T C G A G C T A C G T A G C T
p-value:1e-1
log p-value:-4.403e+00
Information Content per bp:1.814
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif11.76%
Number of Background Sequences with motif2862.2
Percentage of Background Sequences with motif6.32%
Average Position of motif in Targets95.3 +/- 57.1bp
Average Position of motif in Background99.5 +/- 85.0bp
Strand Bias (log2 ratio + to - strand density)-2.5
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----AAACAAAGAA---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C T G A C G T A T C G A A T G C C G T A G T C A C G T A T A C G C G T A C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----AAACAAAGAA---
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C T G A C G T A T C G A A T G C C G T A G T C A C G T A T A C G C G T A C G T A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

SOX10/MA0442.2/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AAACAAAGAA
AAAACAAAGAA
 A C G T C T G A C G T A T C G A A T G C C G T A G T C A C G T A T A C G C G T A C G T A
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AAACAAAGAA--
AAACAAACATTC
 C T G A C G T A T C G A A T G C C G T A G T C A C G T A T A C G C G T A C G T A A C G T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAAGAA
GGAACAAAGR-
 A C G T C T G A C G T A T C G A A T G C C G T A G T C A C G T A T A C G C G T A C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AAACAAAGAA--
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T C T G A C G T A T C G A A T G C C G T A G T C A C G T A T A C G C G T A C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAAGAA
AAAACAAAGG-
 A C G T C T G A C G T A T C G A A T G C C G T A G T C A C G T A T A C G C G T A C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAAGAA
AAAACAATGG-
 A C G T C T G A C G T A T C G A A T G C C G T A G T C A C G T A T A C G C G T A C G T A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAAGAA
VRRACAAWGG-
 A C G T C T G A C G T A T C G A A T G C C G T A G T C A C G T A T A C G C G T A C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAACAAAGAA---
AAAAACCAATTAAGAA
 A C G T A C G T A C G T C T G A C G T A T C G A A T G C C G T A G T C A C G T A T A C G C G T A C G T A A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A