Information for 1-CTCGCCATAT (Motif 1)

A G T C A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T A C T G A C T G A G T C A C T G C G T A A C T G
p-value:1e-21
log p-value:-5.048e+01
Information Content per bp:1.978
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.4 +/- 55.7bp
Average Position of motif in Background79.7 +/- 52.2bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD2/MA0668.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTCGCCATAT---
---GCCATATGGT
 A G T C A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTCGCCATAT
GTCCGCCATTA
 A C G T A G T C A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

Atoh1/MA0461.2/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTCGCCATAT---
---ANCATATGTT
 A G T C A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

NEUROG2/MA0669.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTCGCCATAT---
---GACATATGTT
 A G T C A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTCGCCATAT--
----CCATATGT
 A G T C A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

Twist2/MA0633.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTCGCCATAT---
---ACCATATGTT
 A G T C A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTCGCCATAT---
---ACCATATGGT
 A G T C A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T

ZBTB33/MA0527.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCGCCATAT---
CTCTCGCGAGATCTG
 A C G T A C G T A G T C A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

GFX(?)/Promoter/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTCGCCATAT
ATTCTCGCGAGA-
 A C G T A C G T A C G T A G T C A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A A C G T
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTCGCCATAT---
---ACCATATGTT
 A G T C A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T