Information for 6-CGCACTAC (Motif 12)

A T G C A C T G G T A C T C G A A G T C C A G T C G T A G T A C
Reverse Opposite:
A C T G A C G T G T C A C T A G A G C T A C T G T G A C A T C G
p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.812
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif6.26%
Number of Background Sequences with motif1229.0
Percentage of Background Sequences with motif2.62%
Average Position of motif in Targets94.6 +/- 54.4bp
Average Position of motif in Background100.7 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGCACTAC------
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A T G C A C T G G T A C T C G A A G T C C A G T C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGCACTAC-------
ACATGCTACCTAATAC
 A C G T A T G C A C T G G T A C T C G A A G T C C A G T C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCACTAC
AGCTCATTAT
 A C G T A C G T A T G C A C T G G T A C T C G A A G T C C A G T C G T A G T A C
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGCACTAC--
-CCACTTGAA
 A T G C A C T G G T A C T C G A A G T C C A G T C G T A G T A C A C G T A C G T
A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCACTAC-----
ATGTCACAACAACAC
 A C G T A C G T A T G C A C T G G T A C T C G A A G T C C A G T C G T A G T A C A C G T A C G T A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGCACTAC----
--CACTTCCTCT
 A T G C A C T G G T A C T C G A A G T C C A G T C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCACTAC--
NSCACTYVAV
 A T G C A C T G G T A C T C G A A G T C C A G T C G T A G T A C A C G T A C G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PH0151.1_Pou6f1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CGCACTAC----
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G G T A C T C G A A G T C C A G T C G T A G T A C A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGCACTAC-------
ACTTGCTACCTACACC
 A C G T A T G C A C T G G T A C T C G A A G T C C A G T C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

POL002.1_INR/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGCACTAC-
-TCAGTCTT
 A T G C A C T G G T A C T C G A A G T C C A G T C G T A G T A C A C G T
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T