Information for 10-CTACACCTAGAC (Motif 16)

A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C G T A C T A G A C T G C G A T C T A G A C G T C G T A A C T G
p-value:1e-5
log p-value:-1.240e+01
Information Content per bp:1.920
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets112.9 +/- 47.1bp
Average Position of motif in Background89.0 +/- 41.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CTACACCTAGAC-
-----TCTAGACA
 A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T C G T A A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTACACCTAGAC
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T C G T A A C T G C G T A A G T C
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTACACCTAGAC
ACTATAAATAGA-
 A C G T A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T C G T A A C T G C G T A A G T C
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTACACCTAGAC
TCTAAAAATAGA-
 A C G T A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T C G T A A C T G C G T A A G T C
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CTACACCTAGAC--
------CCAGACAG
 A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTACACCTAGAC
GCTATAAATAGC-
 A C G T A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T C G T A A C T G C G T A A G T C
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CTACACCTAGAC----
------CCAGACRSVB
 A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTACACCTAGAC------
-CAAATCCAGACATCACA
 A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CTACACCTAGAC--
------BCAGACWA
 A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTACACCTAGAC-
---CGTCTAGACA
 A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T C G T A A C T G C G T A A G T C A C G T
A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A