Information for 13-TTTTGCGT (Motif 25)

A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T
Reverse Opposite:
C G T A G T A C A C T G A G T C C G T A C T G A C G T A C T G A
p-value:1e-2
log p-value:-6.435e+00
Information Content per bp:1.793
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif254.6
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets106.6 +/- 57.2bp
Average Position of motif in Background101.1 +/- 54.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TTTTGCGT----
--TTGCGTGCVA
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TTTTGCGT-
---TGCGTG
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGCGT---
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

ATF4/MA0833.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTTGCGT-----
TATTGCATCATCC
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C

POU5F1/MA1115.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCGT--
NATTTGCATNN
 A C G T A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T

CEBPD/MA0836.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTTTGCGT---
-ATTGCGCAAT
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T A C G T
A C G T T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T

CEBPG/MA0838.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTTTGCGT---
-ATTGCGCAAT
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T A C G T
A C G T T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T

CEBPB/MA0466.2/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTTTGCGT---
-ATTGCGCAAT
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T A C G T
A C G T T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTTTGCGT--
-ATTGCATAA
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T
A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A

CEBPE/MA0837.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTTGCGT---
-ATTGCGCAAT
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T A C G T
A C G T T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T