Information for 7-GTGTATTTCTCA (Motif 7)

A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A G T C
p-value:1e-14
log p-value:-3.328e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.9 +/- 40.1bp
Average Position of motif in Background145.0 +/- 46.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTGTATTTCTCA
NNTGTGGATTSS---
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGTATTTCTCA
TGTGGATTNNN--
 A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTGTATTTCTCA--
----HTTTCCCASG
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTGTATTTCTCA---
-NNTTTTTCTTATNT
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

RBPJ/MA1116.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GTGTATTTCTCA--
----NNTTCCCANN
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTGTATTTCTCA
GGGAATTTCC--
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTGTATTTCTCA-
-KCTATTTTTRGH
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTGTATTTCTCA-
-TGAATTATGCAT
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T
A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GTGTATTTCTCA---
-----TTTCACACCT
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GTGTATTTCTCA-
ANNNGGATATATCCNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T