Information for 8-CCATGATTTTCA (Motif 8)

A G T C A G T C G T C A A C G T A C T G G C T A A C G T A C G T A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A C G T A C G T A C A G T A G T C C G T A A C G T A C T G A C T G
p-value:1e-11
log p-value:-2.691e+01
Information Content per bp:1.942
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets107.9 +/- 29.9bp
Average Position of motif in Background98.6 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:1
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CCATGATTTTCA
YCCDNTCCAGGTTTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A A C G T A C T G G C T A A C G T A C G T A C G T A C G T A G T C C G T A
A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCATGATTTTCA---
TNNNATGATTTCNNCNN
 A C G T A C G T A G T C A G T C G T C A A C G T A C T G G C T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCATGATTTTCA
CNGTGATTTN--
 A G T C A G T C G T C A A C G T A C T G G C T A A C G T A C G T A C G T A C G T A G T C C G T A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCATGATTTTCA---
--TTCATTTGCATAT
 A G T C A G T C G T C A A C G T A C T G G C T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCATGATTTTCA--
----GATTTGCATA
 A G T C A G T C G T C A A C G T A C T G G C T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCATGATTTTCA
TGCTGTGATTT---
 A C G T A C G T A G T C A G T C G T C A A C G T A C T G G C T A A C G T A C G T A C G T A C G T A G T C C G T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCATGATTTTCA--
--CTCATTTGCATW
 A G T C A G T C G T C A A C G T A C T G G C T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

PRDM1/MA0508.2/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCATGATTTTCA-
---TCACTTTCAC
 A G T C A G T C G T C A A C G T A C T G G C T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T G C A T G A T C T C G A G A T C C A G T C G A T G C A T T G A C G C T A G A T C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCATGATTTTCA--
--BTVATTWGCATA
 A G T C A G T C G T C A A C G T A C T G G C T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCATGATTTTCA---
-----ATTTGCATAA
 A G T C A G T C G T C A A C G T A C T G G C T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A