Information for 3-GTGCACAC (Motif 9)

T C A G A G C T C T A G G T A C T C G A A G T C T C G A G A T C
Reverse Opposite:
C T A G A G C T A C T G A G C T A C T G G A T C T C G A A G T C
p-value:1e-8
log p-value:-1.936e+01
Information Content per bp:1.798
Number of Target Sequences with motif179.0
Percentage of Target Sequences with motif26.06%
Number of Background Sequences with motif8054.3
Percentage of Background Sequences with motif17.20%
Average Position of motif in Targets96.4 +/- 56.2bp
Average Position of motif in Background100.0 +/- 67.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.85
Offset:-5
Orientation:forward strand
Alignment:-----GTGCACAC----
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T T C A G A G C T C T A G G T A C T C G A A G T C T C G A G A T C A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---GTGCACAC-----
NNTTTGCACACGGCCC
 A C G T A C G T A C G T T C A G A G C T C T A G G T A C T C G A A G T C T C G A G A T C A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----GTGCACAC----
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A C G T T C A G A G C T C T A G G T A C T C G A A G T C T C G A G A T C A C G T A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTGCACAC-----
TTTGCACACGGCAC
 A C G T T C A G A G C T C T A G G T A C T C G A A G T C T C G A G A T C A C G T A C G T A C G T A C G T A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GTGCACAC------
AGCGGCACACACGCAA
 A C G T A C G T T C A G A G C T C T A G G T A C T C G A A G T C T C G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

ZSCAN4/MA1155.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTGCACAC--------
-TGCACACACTGAAAA
 T C A G A G C T C T A G G T A C T C G A A G T C T C G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTGCACAC-
ATGCCCACC
 T C A G A G C T C T A G G T A C T C G A A G T C T C G A G A T C A C G T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTGCACAC------
CGAAGCACACAAAATA
 A C G T A C G T T C A G A G C T C T A G G T A C T C G A A G T C T C G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTGCACAC---
-TTCACACCTT
 T C A G A G C T C T A G G T A C T C G A A G T C T C G A G A T C A C G T A C G T A C G T
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GTGCACAC---
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T C T A G G T A C T C G A A G T C T C G A G A T C A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T