Information for 6-CGTGGAAAAT (Motif 10)

A T G C C T A G A C G T A C T G C T A G C G T A C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T C G A T A C G T G C A T A G T C T G A C C G T A A G T C A T C G
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.812
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif12.82%
Number of Background Sequences with motif41.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets78.3 +/- 53.5bp
Average Position of motif in Background93.7 +/- 50.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT5/MA0606.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CGTGGAAAAT
NATGGAAAAN
 A T G C C T A G A C G T A C T G C T A G C G T A C G T A C G T A C G T A A C G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CGTGGAAAAT
AATGGAAAAT
 A T G C C T A G A C G T A C T G C T A G C G T A C G T A C G T A C G T A A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CGTGGAAAAT
--TGGAAAA-
 A T G C C T A G A C G T A C T G C T A G C G T A C G T A C G T A C G T A A C G T
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CGTGGAAAAT
AATGGAAAAT
 A T G C C T A G A C G T A C T G C T A G C G T A C G T A C G T A C G T A A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CGTGGAAAAT
NNTGGAAANN
 A T G C C T A G A C G T A C T G C T A G C G T A C G T A C G T A C G T A A C G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGTGGAAAAT
CSTGGGAAAD
 A T G C C T A G A C G T A C T G C T A G C G T A C G T A C G T A C G T A A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGTGGAAAAT---
ACCGTGACTAATTNN
 A C G T A C G T A T G C C T A G A C G T A C T G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

RBPJ/MA1116.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGTGGAAAAT
CCTGGGAAAG
 A T G C C T A G A C G T A C T G C T A G C G T A C G T A C G T A C G T A A C G T
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

PH0067.1_Hoxc12/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGTGGAAAAT----
TTAGGTCGTAAAATTTC
 A C G T A C G T A C G T A T G C C T A G A C G T A C T G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

PH0077.1_Hoxd12/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGTGGAAAAT----
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A T G C C T A G A C G T A C T G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T