Information for 7-TTCAGTTTTC (Motif 11)

C G A T A C G T A G T C G T C A A C T G A C G T A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif15.38%
Number of Background Sequences with motif132.9
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets88.0 +/- 61.3bp
Average Position of motif in Background95.5 +/- 75.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX2/MA1119.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TTCAGTTTTC----
GTATCAGGTTTCAGNN
 A C G T A C G T C G A T A C G T A G T C G T C A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T

SIX1/MA1118.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGTTTTC
TATCAGGTTAC
 A C G T C G A T A C G T A G T C G T C A A C T G A C G T A C G T A C G T A C G T A G T C
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTCAGTTTTC
GKVTCADRTTWC
 A C G T A C G T C G A T A C G T A G T C G T C A A C T G A C G T A C G T A C G T A C G T A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTCAGTTTTC
AGTTTCAKTTTC-
 A C G T A C G T A C G T C G A T A C G T A G T C G T C A A C T G A C G T A C G T A C G T A C G T A G T C
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTCAGTTTTC-
VGGTVTCAGRTTWCA
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C G T C A A C T G A C G T A C G T A C G T A C G T A G T C A C G T
T A G C T C A G T C A G C A G T T C A G A C G T A G T C T C G A C T A G C T A G A C G T A C G T C G A T G T A C G T C A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTCAGTTTTC
GKMTCADRTTWC
 A C G T A C G T C G A T A C G T A G T C G T C A A C T G A C G T A C G T A C G T A C G T A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGTTTTC
ACTTTCACTTTC-
 A C G T A C G T A C G T C G A T A C G T A G T C G T C A A C T G A C G T A C G T A C G T A C G T A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTCAGTTTTC
AGTTTCAGTTTC-
 A C G T A C G T A C G T C G A T A C G T A G T C G T C A A C T G A C G T A C G T A C G T A C G T A G T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGTTTTC
RSTTTCRSTTTC-
 A C G T A C G T A C G T C G A T A C G T A G T C G T C A A C T G A C G T A C G T A C G T A C G T A G T C
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTCAGTTTTC
TCAGTTTCATTTTCC
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T A G T C G T C A A C T G A C G T A C G T A C G T A C G T A G T C
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C