Information for 4-AAGTGTGC (Motif 15)

T G C A C G T A A C T G C G A T A C T G A C G T C T A G A G T C
Reverse Opposite:
C T A G G A T C C G T A A G T C C G T A A G T C A C G T A C G T
p-value:1e-6
log p-value:-1.588e+01
Information Content per bp:1.792
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif25.64%
Number of Background Sequences with motif1368.1
Percentage of Background Sequences with motif2.91%
Average Position of motif in Targets102.3 +/- 49.5bp
Average Position of motif in Background100.9 +/- 66.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGTGC
NTCAAGTGG--
 A C G T A C G T A C G T T G C A C G T A A C T G C G A T A C T G A C G T C T A G A G T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTGC
TTGAGTGSTT
 A C G T A C G T T G C A C G T A A C T G C G A T A C T G A C G T C T A G A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGTGC
NTCAAGTGGN-
 A C G T A C G T A C G T T G C A C G T A A C T G C G A T A C T G A C G T C T A G A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTGC
TTAAGTGGN-
 A C G T A C G T T G C A C G T A A C T G C G A T A C T G A C G T C T A G A G T C
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAGTGTGC
TTRAGTGSYK
 A C G T A C G T T G C A C G T A A C T G C G A T A C T G A C G T C T A G A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGTGC
CTYRAGTGSY-
 A C G T A C G T A C G T T G C A C G T A A C T G C G A T A C T G A C G T C T A G A G T C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTGC
TTAAGTGGT-
 A C G T A C G T T G C A C G T A A C T G C G A T A C T G A C G T C T A G A G T C
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AAGTGTGC
BTBRAGTGSN-
 A C G T A C G T A C G T T G C A C G T A A C T G C G A T A C T G A C G T C T A G A G T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTGC
TTAAGTGCTT
 A C G T A C G T T G C A C G T A A C T G C G A T A C T G A C G T C T A G A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTGC
TTAAGTGC--
 A C G T A C G T T G C A C G T A A C T G C G A T A C T G A C G T C T A G A G T C
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T