Information for 2-GTCCACTGTAGG (Motif 2)

A C T G A C G T A G T C A G T C C G T A A G T C A C G T A T C G A G C T C G T A C T A G A C T G
Reverse Opposite:
A G T C A G T C A C G T C T G A A T G C C G T A A C T G A C G T A C T G A C T G C G T A A G T C
p-value:1e-15
log p-value:-3.638e+01
Information Content per bp:1.916
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif15.38%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets69.8 +/- 49.1bp
Average Position of motif in Background103.5 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTCCACTGTAGG
ATCCAC------
 A C T G A C G T A G T C A G T C C G T A A G T C A C G T A T C G A G C T C G T A C T A G A C T G
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTCCACTGTAGG
-NSCACTYVAV-
 A C T G A C G T A G T C A G T C C G T A A G T C A C G T A T C G A G C T C G T A C T A G A C T G
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCCACTGTAGG---
AATCGCACTGCATTCCG
 A C G T A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A T C G A G C T C G T A C T A G A C T G A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GTCCACTGTAGG
GGCAAAAGTCCAATAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A T C G A G C T C G T A C T A G A C T G
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTCCACTGTAGG
--CCACTTGAA-
 A C T G A C G T A G T C A G T C C G T A A G T C A C G T A T C G A G C T C G T A C T A G A C T G
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTCCACTGTAGG
-RSCACTYRAG-
 A C T G A C G T A G T C A G T C C G T A A G T C A C G T A T C G A G C T C G T A C T A G A C T G
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTCCACTGTAGG
AASCACTCAA--
 A C T G A C G T A G T C A G T C C G T A A G T C A C G T A T C G A G C T C G T A C T A G A C T G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTCCACTGTAGG
-ACCACTTGAA-
 A C T G A C G T A G T C A G T C C G T A A G T C A C G T A T C G A G C T C G T A C T A G A C T G
A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTCCACTGTAGG
MRSCACTYAA--
 A C T G A C G T A G T C A G T C C G T A A G T C A C G T A T C G A G C T C G T A C T A G A C T G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTCCACTGTAGG---
---CACAGCAGGGGG
 A C T G A C G T A G T C A G T C C G T A A G T C A C G T A T C G A G C T C G T A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G