Information for 12-TCTCTCTC (Motif 20)

A C G T A G T C A C G T A G T C A C G T A G T C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A C T A G C G T A A C T G C G T A
p-value:1e0
log p-value:-1.417e+00
Information Content per bp:1.951
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif10.26%
Number of Background Sequences with motif3036.7
Percentage of Background Sequences with motif6.46%
Average Position of motif in Targets83.3 +/- 23.1bp
Average Position of motif in Background100.2 +/- 65.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCTC------
ACCACTCTCGGTCAC
 A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTCTC---
VCCTCTCTGDDY
 A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCTCTC--
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCTCTCTC--
CTGTCTGTCACCT
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTCTC--
TGTCTGDCACCT
 A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTCTCTC----
ACTTTCACTTTC
 A C G T A G T C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T A C G T A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCTCTCTC----
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCTC------
AGTATTCTCGGTTGC
 A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PRDM1/MA0508.2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTCTCTC
TCACTTTCAC
 A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G A T A G T C
G C A T G A T C T C G A G A T C C A G T C G A T G C A T T G A C G C T A G A T C

PBX3/MA1114.1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCTCTC----
NNNCCTGTCACTCANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C