Information for 2-TKTAGGACST (Motif 5)

A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T
Reverse Opposite:
C G T A A T G C A C T G A C G T A G T C A G T C A C G T C G T A G T A C C G T A
p-value:1e-12
log p-value:-2.937e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif15.38%
Number of Background Sequences with motif29.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets109.6 +/- 61.4bp
Average Position of motif in Background124.9 +/- 82.1bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TKTAGGACST--
NNNTTTTACGACNTTN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0065.1_Hoxc10/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TKTAGGACST--
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0047.1_Hoxa11/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TKTAGGACST--
NNGTTTTACGACTTTA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0076.1_Hoxd11/Jaspar

Match Rank:4
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TKTAGGACST--
ANNATTTTACGACNTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

PH0067.1_Hoxc12/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TKTAGGACST--
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TKTAGGACST--
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TKTAGGACST----
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TKTAGGACST
NTTTTACGAC--
 A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TKTAGGACST
NTTTTACGACC-
 A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TKTAGGACST
NTTTTACGAC--
 A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T