Information for 1-AAGCTTCCAC (Motif 1)

C G T A C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G C G T A C G T A A C T G A G T C A C G T A C G T
p-value:1e0
log p-value:-1.792e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SFL1(MacIsaac)/Yeast

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-AAGCTTCCAC
GAAGCTTC---
 A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A G T C
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T

GCR2(MacIsaac)/Yeast

Match Rank:2
Score:0.78
Offset:2
Orientation:forward strand
Alignment:AAGCTTCCAC
--GCTTCCN-
 C G T A C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A G T C
A C G T A C G T T A C G A G T C C G A T A C G T A G T C A T G C G C A T A C G T

GCR1/MA0304.1/Jaspar

Match Rank:3
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:AAGCTTCCAC
-GGCTTCCA-
 C G T A C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A G T C
A C G T T C A G C A T G T G A C C G A T A C G T A T G C A T G C G C T A A C G T

GCR1/MA0304.1/Jaspar

Match Rank:4
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:AAGCTTCCAC
-GGCTTCCA-
 C G T A C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A G T C
A C G T T C A G C A T G T G A C C G A T A C G T A T G C A T G C G C T A A C G T

GCR2/MA0305.1/Jaspar

Match Rank:5
Score:0.77
Offset:2
Orientation:forward strand
Alignment:AAGCTTCCAC
--GCTTCCT-
 C G T A C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A G T C
A C G T A C G T T A C G A G T C C G A T A C G T A G T C A T G C G C A T A C G T

GCR2/MA0305.1/Jaspar

Match Rank:6
Score:0.77
Offset:2
Orientation:forward strand
Alignment:AAGCTTCCAC
--GCTTCCT-
 C G T A C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A G T C
A C G T A C G T T A C G A G T C C G A T A C G T A G T C A T G C G C A T A C G T

GCR1/Literature(Harbison)/Yeast

Match Rank:7
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AAGCTTCCAC
-GGCTTCCAC
 C G T A C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A G T C
A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C C G A T A G T C

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AAGCTTCCAC
CAAGCTT----
 A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

HSF6(HSF)/col-HSF6-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------AAGCTTCCAC
TTYTAGAAGCTTCTA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A G T C
G C A T G C A T G A T C G C A T T C G A A C T G C G T A C G T A A T C G T A G C C G A T A C G T A G T C A G C T C G T A A C G T

MOD(RRM)/Drosophila_melanogaster-RNCMPT00140-PBM/HughesRNA

Match Rank:10
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AAGCTTCCAC-
----TTCCACT
 C G T A C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G T C A G T C C G T A G A T C A C G T