Information for 2-AAATATGATA (Motif 2)

C G T A C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T
p-value:1e0
log p-value:-1.792e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets183.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AAATATGATA-----
NNATNTGATANNNNN
 C G T A C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

CRC(C2C2YABBY)/col-CRC-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:AAATATGATA-
---TATSATWA
 C G T A C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T
A C G T A C G T A C G T C G A T G T C A A C G T A T C G C G T A A C G T C G T A T C G A

So/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AAATATGATA--
--TAATGATACG
 C G T A C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T
A C G T A C G T C A G T C G T A C T G A A C G T A C T G C G T A A C G T C G T A A G T C A C G T

AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AAATATGATA
WNAAATATCWWN
 A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A
C G T A C T G A C G T A C G T A C G T A A C G T C G T A A C G T A G T C G C A T C G A T C G A T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAATATGATA-
GWAAYHTGABMC
 A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Optix/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AAATATGATA--
--AAGTGATAAA
 C G T A C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T
A C G T A C G T G C T A G C T A T A C G A G C T A C T G C G T A A C G T C T G A A C G T A C G T

Optix/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AAATATGATA
--ANGTGATA
 C G T A C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A
A C G T A C G T G C T A G T C A T A C G A G C T C T A G G T C A C A G T C G T A

SUP-26(RRM)/Caenorhabditis_elegans-RNCMPT00182-PBM/HughesRNA

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAATATGATA
TAAATAT----
 A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A
A G C T C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T

AT3G10113/MA1191.1/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AAATATGATA
TAAAAAAATATCTTA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A
G C A T G C T A G C T A T C G A G C T A C G T A C G T A C T G A A C G T C G T A A C G T A G T C G C A T G C A T G C T A

Antp/dmmpmm(Down)/fly

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAATATGATA--
ATAAATAATAAT
 C G T A C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T
C G T A G C A T G C T A G C T A C G T A G C A T T G C A T G C A G C A T G T C A C G T A C G A T