Information for 3-AAGTGCATTT (Motif 3)

C G T A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C A C G T A C G T
p-value:1e0
log p-value:-1.792e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets15.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CST6(MacIsaac)/Yeast

Match Rank:1
Score:0.81
Offset:3
Orientation:forward strand
Alignment:AAGTGCATTT-
---TGCATTTN
 C G T A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G T A C C G T A A C G T G A C T A G C T G A T C

byn/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAGTGCATTT
AAGTGCGA--
 C G T A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
C G T A C G T A A C T G A G C T A C T G G A T C C T A G C G T A A C G T A C G T

tin/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCATTT
TTAAGTGC----
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C T G A A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T

AT2G33550(Trihelix)/colamp-AT2G33550-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAGTGCATTT--
TTTAAGGGCAYTTTT
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C A T G C A T C G A T C G T A C T G A C T A G A C T G C T A G G A T C G C T A G A C T G C A T G C A T G C A T G A C T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCATTT
TTAAGTGC----
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T

Lm_0212(RRM)/Leishmania_major-RNCMPT00212-PBM/HughesRNA

Match Rank:6
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AAGTGCATTT-
----NCATTTT
 C G T A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGCATTT
NTCAAGTGG----
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAGTGCATTT-
AAATTSAATTTN
 A C G T C G T A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C T G A C G T A A G C T A G C T A T C G T C G A C T G A A C G T G A C T C G A T A C T G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCATTT
TTAAGTGCTT--
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAGTGCATTT
TTRAGTGSYK--
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T