Information for 4-TCTCCAGTATTG (Motif 6)

A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T C G T A A G T C A C G T A C T G A C T G C G T A A C T G C G T A
p-value:1e0
log p-value:-1.792e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TUT1(RRM,Znf)/Homo_sapiens-RNCMPT00075-PBM/HughesRNA

Match Rank:1
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TCTCCAGTATTG
-----AGTATCG
 A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A A C G T A G T C A C T G

YOX1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCTCCAGTATTG-
-CGTCANTATTCT
 A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G A C G T
A C G T A G C T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T A C G T A T C G A C G T

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCTCCAGTATTG
TTTCAAGTGA--
 A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
C G A T A G C T A C G T A G T C C G T A C G T A A C T G C G A T C T A G A C G T A C G T A C G T

ATHB53/MA1215.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCTCCAGTATTG-
--TCAATTATTGG
 A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G A C G T
A C G T A C G T G C A T G A T C G C T A C G T A A C G T G C A T C G T A A C G T A C G T C A T G C A T G

LIN28A(CSD,Znf)/Homo_sapiens-RNCMPT00036-PBM/HughesRNA

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCTCCAGTATTG
TTCTCCN------
 A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
A G C T C G A T A G T C A C G T A G T C A G T C C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCTCCAGTATTG-----
---CTAATATTGCTAAA
 A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCTCCAGTATTG-----
---CTAATATTGCTAAA
 A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

HAT5/MA0008.2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCTCCAGTATTG-
-TTCAATTATTGC
 A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G A C G T
A C G T A G C T G A C T A T G C G C T A C G T A A C G T A G C T C G T A A C G T A C G T T C A G T A G C

PB0106.1_Arid5a_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTCCAGTATTG----
TNNTTTCGTATTNNANN
 A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

ATHB5(HD-ZIP)/Arabidopsis thaliana/AthaMap

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCTCCAGTATTG
GGTCCAATTATTG
 A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
A C T G A T C G A G C T A T G C A T G C G T C A C G T A A C G T A G C T C G T A A C G T A C G T A C T G