Information for 5-CTGATGAATCCA (Motif 7)

A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A G T C C G T A A C T G
p-value:1e0
log p-value:-1.792e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbm47(RRM)/Xenopus_tropicalis-RNCMPT00280-PBM/HughesRNA

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTGATGAATCCA
--GATGATN---
 A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A
A C G T A C G T A C T G C G T A A C G T A T C G C G T A C G A T G A C T A C G T A C G T A C G T

RBM6(RRM)/Homo_sapiens-RNCMPT00170-PBM/HughesRNA

Match Rank:2
Score:0.66
Offset:6
Orientation:forward strand
Alignment:CTGATGAATCCA-
------AATCCAG
 A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C G T A G T C A G T C C G T A C T A G

RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTGATGAATCCA
--GATGATN---
 A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A
A C G T A C G T A C T G C G T A A C G T A T C G C G T A C G A T C G A T A C G T A C G T A C G T

HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGATGAATCCA
-TGATGGAW---
 A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A
A C G T A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGATGAATCCA----
GNNNATTAATCCCTNCN
 A C G T A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGATGAATCCA
NNTNTCATGAATGT-
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGATGAATCCA
ATGATGCAAT--
 A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGATGAATCCA
-TGATKGATGR-
 A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A
A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGATGAATCCA----
----SSAATCCACANN
 A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGATGAATCCA----
GANNATTAATCCCTNNN
 A C G T A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A