Information for 8-CYTGTACA (Motif 10)

A G T C A G T C G C A T A T C G G C A T C T G A G T A C C T G A
Reverse Opposite:
G A C T A C T G A G C T C G T A T A G C C G T A T C A G T C A G
p-value:1e-12
log p-value:-2.886e+01
Information Content per bp:1.677
Number of Target Sequences with motif126.0
Percentage of Target Sequences with motif16.58%
Number of Background Sequences with motif4062.8
Percentage of Background Sequences with motif8.42%
Average Position of motif in Targets98.9 +/- 53.9bp
Average Position of motif in Background99.6 +/- 65.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CYTGTACA--
GCTCGTAAAAA
 A C G T A G T C A G T C G C A T A T C G G C A T C T G A G T A C C T G A A C G T A C G T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CYTGTACA----
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A G T C G C A T A T C G G C A T C T G A G T A C C T G A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CYTGTACA--
CYHATAAAAN
 A G T C A G T C G C A T A T C G G C A T C T G A G T A C C T G A A C G T A C G T
T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CYTGTACA-
CCYMATAAAA
 A C G T A G T C A G T C G C A T A T C G G C A T C T G A G T A C C T G A A C G T
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CYTGTACA----
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A G T C G C A T A T C G G C A T C T G A G T A C C T G A A C G T A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CYTGTACA---
NGYCATAAAWCH
 A C G T A G T C A G T C G C A T A T C G G C A T C T G A G T A C C T G A A C G T A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CYTGTACA-
CCAGGAACAG
 A C G T A G T C A G T C G C A T A T C G G C A T C T G A G T A C C T G A A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CYTGTACA-
NCYAATAAAA
 A C G T A G T C A G T C G C A T A T C G G C A T C T G A G T A C C T G A A C G T
C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CYTGTACA--
--DGTAAACA
 A G T C A G T C G C A T A T C G G C A T C T G A G T A C C T G A A C G T A C G T
A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

FOXI1/MA0042.2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CYTGTACA--
---GTAAACA
 A G T C A G T C G C A T A T C G G C A T C T G A G T A C C T G A A C G T A C G T
A C G T A C G T A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A