Information for 9-TCTTCAAACAAC (Motif 12)

A C G T A G T C G A C T A G C T G A T C C G T A C T G A C G T A A G T C G T C A C G T A A G T C
Reverse Opposite:
T C A G A C G T A C G T A C T G A C G T A G C T A C G T C A T G C T G A C T G A A C T G C G T A
p-value:1e-12
log p-value:-2.811e+01
Information Content per bp:1.803
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif128.8
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets100.9 +/- 56.9bp
Average Position of motif in Background105.9 +/- 65.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCTTCAAACAAC
---GTAAACAAT
 A C G T A G T C G A C T A G C T G A T C C G T A C T G A C G T A A G T C G T C A C G T A A G T C
A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCTTCAAACAAC---
ATATCAAAACAAAACA
 A C G T A C G T A G T C G A C T A G C T G A T C C G T A C T G A C G T A A G T C G T C A C G T A A G T C A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

HOXC10/MA0905.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCTTCAAACAAC
GTCGTAAAAT---
 A C G T A C G T A G T C G A C T A G C T G A T C C G T A C T G A C G T A A G T C G T C A C G T A A G T C
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCTTCAAACAAC
AGTCGTAAAAA---
 A C G T A C G T A C G T A G T C G A C T A G C T G A T C C G T A C T G A C G T A A G T C G T C A C G T A A G T C
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TCTTCAAACAAC
-----NAACAAT
 A C G T A G T C G A C T A G C T G A T C C G T A C T G A C G T A A G T C G T C A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCTTCAAACAAC
GGTCGTAAAAT---
 A C G T A C G T A C G T A G T C G A C T A G C T G A T C C G T A C T G A C G T A A G T C G T C A C G T A A G T C
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCTTCAAACAAC
GTCGTAAAAA---
 A C G T A C G T A G T C G A C T A G C T G A T C C G T A C T G A C G T A A G T C G T C A C G T A A G T C
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCTTCAAACAAC---
-----AAACCACANN
 A C G T A G T C G A C T A G C T G A T C C G T A C T G A C G T A A G T C G T C A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTTCAAACAAC-----
TCACGGAACAATAGGTG
 A C G T A G T C G A C T A G C T G A T C C G T A C T G A C G T A A G T C G T C A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCTTCAAACAAC
GGTCGTAAAATT--
 A C G T A C G T A C G T A G T C G A C T A G C T G A T C C G T A C T G A C G T A A G T C G T C A C G T A A G T C
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T A C G T