Information for 13-TGCCWAMCCA (Motif 16)

A C G T A C T G A G T C A T G C C G A T C G T A G T A C A G T C A G T C C G T A
Reverse Opposite:
C G A T A C T G C T A G A C T G A C G T C G T A A T C G A C T G A G T C C G T A
p-value:1e-10
log p-value:-2.520e+01
Information Content per bp:1.835
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif237.0
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets88.4 +/- 46.7bp
Average Position of motif in Background96.2 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TGCCWAMCCA
GGTGCCAAGT--
 A C G T A C G T A C G T A C T G A G T C A T G C C G A T C G T A G T A C A G T C A G T C C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGCCWAMCCA
ATGCCAACC--
 A C G T A C G T A C T G A G T C A T G C C G A T C G T A G T A C A G T C A G T C C G T A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TGCCWAMCCA--
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C C G A T C G T A G T A C A G T C A G T C C G T A A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TGCCWAMCCA
CGTGCCAAG---
 A C G T A C G T A C G T A C T G A G T C A T G C C G A T C G T A G T A C A G T C A G T C C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGCCWAMCCA
ATGCCCACC--
 A C G T A C G T A C T G A G T C A T G C C G A T C G T A G T A C A G T C A G T C C G T A
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGCCWAMCCA
TTGCCAAG---
 A C G T A C G T A C T G A G T C A T G C C G A T C G T A G T A C A G T C A G T C C G T A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGCCWAMCCA
NNTGCCAAGNN-
 A C G T A C G T A C G T A C T G A G T C A T G C C G A T C G T A G T A C A G T C A G T C C G T A
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCCWAMCCA-----
TGCTGAGTCATNNTG
 A C G T A C T G A G T C A T G C C G A T C G T A G T A C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCCWAMCCA
TGCCAGCB--
 A C G T A C T G A G T C A T G C C G A T C G T A G T A C A G T C A G T C C G T A
G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T A C G T

NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGCCWAMCCA-
AWWWTGCTGAGTCAT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C C G A T C G T A G T A C A G T C A G T C C G T A A C G T
C G T A C G T A C G T A G C A T G C A T A C T G G T A C G A C T C T A G G C T A T A C G G A C T T G A C C G T A A G C T