Information for 17-GTCGATCATTTA (Motif 19)

A C T G A C G T G A T C A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A T G C C A T G C G T A A G T C
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.922
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.0 +/- 33.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GTCGATCATTTA--
----ANCGTTTANN
 A C T G A C G T G A T C A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTCGATCATTTA--
NGTTAATNATTAACN
 A C G T A C T G A C G T G A T C A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1B/MA0153.2/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTCGATCATTTA-
GTTAATGATTAAC
 A C T G A C G T G A T C A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T
C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTCGATCATTTA
GTTAATNATTAA
 A C T G A C G T G A T C A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T C G T A
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTCGATCATTTA
GGTTAAACATTAA
 A C G T A C T G A C G T G A T C A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T C G T A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

Barhl1/MA0877.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GTCGATCATTTA--
----NNCAATTANN
 A C T G A C G T G A T C A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTCGATCATTTA
--TAATCAATTA
 A C T G A C G T G A T C A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T C G T A
A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCGATCATTTA---
TATCATAATTAAGGA
 A C T G A C G T G A T C A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

NR1H4/MA1110.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTCGATCATTTA
-NAGGTCATTGA
 A C T G A C G T G A T C A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T C G T A
A C G T C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTCGATCATTTA----
GAAGATCAATCACTTA
 A C T G A C G T G A T C A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A