Information for 17-TGCAAAGCTT (Motif 21)

C A G T A C T G G A T C G T C A C G T A C T G A A C T G A G T C A G C T G A C T
Reverse Opposite:
C T G A C T G A C T A G G T A C G A C T A C G T C A G T C T A G A G T C G T C A
p-value:1e-8
log p-value:-1.927e+01
Information Content per bp:1.808
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.68%
Number of Background Sequences with motif469.1
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets122.5 +/- 56.1bp
Average Position of motif in Background100.9 +/- 61.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:TGCAAAGCTT-
----AAGCTTG
 C A G T A C T G G A T C G T C A C G T A C T G A A C T G A G T C A G C T G A C T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

NFIC/MA0161.2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGCAAAGCTT
NNTGCCAAGNN-
 A C G T A C G T C A G T A C T G G A T C G T C A C G T A C T G A A C T G A G T C A G C T G A C T
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGCAAAGCTT
ATATGCAAATT--
 A C G T A C G T A C G T C A G T A C T G G A T C G T C A C G T A C T G A A C T G A G T C A G C T G A C T
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T A C G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGCAAAGCTT
TATGCAAATC--
 A C G T A C G T C A G T A C T G G A T C G T C A C G T A C T G A A C T G A G T C A G C T G A C T
G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCAAAGCTT
GGTGCCAAGT--
 A C G T A C G T C A G T A C T G G A T C G T C A C G T A C T G A A C T G A G T C A G C T G A C T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGCAAAGCTT
TTGCCAAG---
 A C G T C A G T A C T G G A T C G T C A C G T A C T G A A C T G A G T C A G C T G A C T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAAGCTT
TTATGCAAAT---
 A C G T A C G T A C G T C A G T A C T G G A T C G T C A C G T A C T G A A C T G A G T C A G C T G A C T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGCAAAGCTT
AGATGCAATCCC-
 A C G T A C G T A C G T C A G T A C T G G A T C G T C A C G T A C T G A A C T G A G T C A G C T G A C T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGCAAAGCTT
ATATGCAAAT---
 A C G T A C G T A C G T C A G T A C T G G A T C G T C A C G T A C T G A A C T G A G T C A G C T G A C T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGCAAAGCTT
CGTGCCAAG---
 A C G T A C G T C A G T A C T G G A T C G T C A C G T A C T G A A C T G A G T C A G C T G A C T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T