Information for 23-TGCACGTATGTG (Motif 24)

A G C T C T A G A G T C C G T A A G T C C T A G A C G T C G T A A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C C T G A
p-value:1e-4
log p-value:-1.134e+01
Information Content per bp:1.935
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif18.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets83.6 +/- 50.1bp
Average Position of motif in Background75.9 +/- 79.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TGCACGTATGTG
-GCACGTAY---
 A G C T C T A G A G T C C G T A A G T C C T A G A C G T C G T A A C G T A C T G A C G T A C T G
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGCACGTATGTG
BGCACGTA----
 A G C T C T A G A G T C C G T A A G T C C T A G A C G T C G T A A C G T A C T G A C G T A C T G
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGCACGTATGTG
-GCACGTACCC-
 A G C T C T A G A G T C C G T A A G T C C T A G A C G T C G T A A C G T A C T G A C G T A C T G
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGCACGTATGTG
NNGCACGTNC---
 A C G T A G C T C T A G A G T C C G T A A G T C C T A G A C G T C G T A A C G T A C T G A C G T A C T G
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C A C G T A C G T A C G T

T/MA0009.2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGCACGTATGTG---
TCACACCTAGGTGTGA
 A C G T A G C T C T A G A G T C C G T A A G T C C T A G A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C G T
G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGCACGTATGTG
-GCACGTNC---
 A G C T C T A G A G T C C G T A A G T C C T A G A C G T C G T A A C G T A C T G A C G T A C T G
A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T

TBX19/MA0804.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGCACGTATGTG-----
TTTCACACCTAGGTGTGAAA
 A C G T A C G T A C G T A G C T C T A G A G T C C G T A A G T C C T A G A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A G C T A G C T A

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGCACGTATGTG
--ACCATATGTT
 A G C T C T A G A G T C C G T A A G T C C T A G A C G T C G T A A C G T A C T G A C G T A C T G
A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCACGTATGTG
GGCACGTGTC--
 A G C T C T A G A G T C C G T A A G T C C T A G A C G T C G T A A C G T A C T G A C G T A C T G
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGCACGTATGTG
--CACGTGTGCH
 A G C T C T A G A G T C C G T A A G T C C T A G A C G T C G T A A C G T A C T G A C G T A C T G
A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T