Information for 24-GCTGCCGCGGCA (Motif 25)

A C T G A T G C A G C T A C T G A G T C A T G C C T A G A T G C A T C G A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C A T G C A T C G A G T C A T C G A C T G A G T C C T G A A T C G A G T C
p-value:1e-4
log p-value:-1.014e+01
Information Content per bp:1.831
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.0 +/- 79.7bp
Average Position of motif in Background113.1 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTGCCGCGGCA-
NGTTGCCATGGCAA
 A C G T A C T G A T G C A G C T A C T G A G T C A T G C C T A G A T G C A T C G A C T G A G T C C T G A A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCCGCGGCA
TGCCCNNAGGGCA
 A C G T A C T G A T G C A G C T A C T G A G T C A T G C C T A G A T G C A T C G A C T G A G T C C T G A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCCGCGGCA
TGCCCTNAGGGCA
 A C G T A C T G A T G C A G C T A C T G A G T C A T G C C T A G A T G C A T C G A C T G A G T C C T G A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

MAFG/MA0659.1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGCCGCGGCA----
AATNTGCTGACTCAGCANTTT
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C T G A G T C A T G C C T A G A T G C A T C G A C T G A G T C C T G A A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C G T A G A C T T A C G G T A C G A C T C A T G G T C A T A G C C G A T G T A C C T G A C A T G A T G C C T G A G C T A C G A T G C A T G C A T

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTGCCGCGGCA--
TCCGCCCCCGCATT
 A C T G A T G C A G C T A C T G A G T C A T G C C T A G A T G C A T C G A C T G A G T C C T G A A C G T A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCCGCGGCA
TGCCCTNAGGGCA
 A C G T A C T G A T G C A G C T A C T G A G T C A T G C C T A G A T G C A T C G A C T G A G T C C T G A
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTGCCGCGGCA--
CGGTTGCCATGGCAAC
 A C G T A C G T A C T G A T G C A G C T A C T G A G T C A T G C C T A G A T G C A T C G A C T G A G T C C T G A A C G T A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTGCCGCGGCA---
-ATGCCCGGGCATGT
 A C T G A T G C A G C T A C T G A G T C A T G C C T A G A T G C A T C G A C T G A G T C C T G A A C G T A C G T A C G T
A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

CREB3L1/MA0839.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCCGCGGCA-
TGATGACGTGGCAN
 A C G T A C T G A T G C A G C T A C T G A G T C A T G C C T A G A T G C A T C G A C T G A G T C C T G A A C G T
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

Rfx1/MA0509.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTGCCGCGGCA--
GTTGCCATGGNAAC
 A C T G A T G C A G C T A C T G A G T C A T G C C T A G A T G C A T C G A C T G A G T C C T G A A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C