Information for 11-GAGTTGAACS (Motif 11)

C T A G C G T A A T C G A G C T A C G T A C T G T G C A C T G A G A T C T A G C
Reverse Opposite:
A T C G C T A G A G C T A C G T T G A C T G C A C T G A T A G C C G A T A G T C
p-value:1e-35
log p-value:-8.198e+01
Information Content per bp:1.731
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif6.00%
Number of Background Sequences with motif71.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets91.5 +/- 59.4bp
Average Position of motif in Background103.5 +/- 61.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAGTTGAACS
TGAGTTCA---
 A C G T C T A G C G T A A T C G A G C T A C G T A C T G T G C A C T G A G A T C T A G C
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T

MYBL2/MA0777.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTGAACS---
GACNGTTTAACGGTT
 A C G T A C G T C T A G C G T A A T C G A G C T A C G T A C T G T G C A C T G A G A T C T A G C A C G T A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAGTTGAACS--
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T C T A G C G T A A T C G A G C T A C G T A C T G T G C A C T G A G A T C T A G C A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTGAACS
CAAAGKTCAA--
 A C G T A C G T C T A G C G T A A T C G A G C T A C G T A C T G T G C A C T G A G A T C T A G C
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T

MYB/MA0100.3/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTGAACS
NNCAGTTGNN--
 A C G T A C G T C T A G C G T A A T C G A G C T A C G T A C T G T G C A C T G A G A T C T A G C
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGTTGAACS
-ATTTGAATT
 C T A G C G T A A T C G A G C T A C G T A C T G T G C A C T G A G A T C T A G C
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------GAGTTGAACS
NMMNBAAAGGGTTAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A T C G A G C T A C G T A C T G T G C A C T G A G A T C T A G C
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAGTTGAACS--
--TTTGAAACCG
 C T A G C G T A A T C G A G C T A C G T A C T G T G C A C T G A G A T C T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTGAACS------
NNANTTGACCCCTNNNN
 A C G T C T A G C G T A A T C G A G C T A C G T A C T G T G C A C T G A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGTTGAACS-
GGAAGTGAAAST
 A C G T C T A G C G T A A T C G A G C T A C G T A C T G T G C A C T G A G A T C T A G C A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T