Information for 12-CTCAGAAACT (Motif 13)

A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T C G A T A G T C A C G T A C T G C G T A A T C G
p-value:1e-28
log p-value:-6.533e+01
Information Content per bp:1.951
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif4.32%
Number of Background Sequences with motif39.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets109.5 +/- 66.8bp
Average Position of motif in Background117.0 +/- 43.5bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTCAGAAACT--
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTCAGAAACT
NTTTCTNAGAAA--
 A C G T A C G T A C G T A C G T A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTCAGAAACT-
-ACTGAAACCA
 A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCAGAAACT-
SCCTAGCAACAG
 A C G T A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PH0048.1_Hoxa13/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTCAGAAACT--
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCAGAAACT
NACAGGAAAT
 A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCAGAAACT-
RHHCAGAGAGGB
 A C G T A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTCAGAAACT--
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCAGAAACT--
HWWGTCAGCAWWTTT
 A C G T A C G T A C G T A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGAAACT-
NGTCAGCANTTT
 A C G T A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T