Information for 13-GGCCTTCGTT (Motif 14)

A C T G A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C T G C G T A C G T A A C T G A C T G A G T C A G T C
p-value:1e-27
log p-value:-6.400e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.5 +/- 54.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGCCTTCGTT
--CCTTTGTT
 A C T G A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTTCGTT-----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

SOX10/MA0442.2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGCCTTCGTT--
-NNCTTTGTTNN
 A C T G A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGCCTTCGTT--
--CCTTTGTTTT
 A C T G A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTTCGTT-----
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTTCGTT
CNAGGCCT-----
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGCCTTCGTT--
--YCTTTGTTCC
 A C T G A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTTCGTT
CTAGGCCT-----
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCCTTCGTT-
-NCCATTGTTC
 A C T G A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T
A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGCCTTCGTT
--CCWTTGTY
 A C T G A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T