Information for 19-CCTAGACAAGAG (Motif 17)

A G T C A G T C A G C T C T G A A C T G C G T A A T G C C G T A C G T A C T A G C G T A A C T G
Reverse Opposite:
A G T C C G A T A G T C A C G T A C G T A T C G C G A T A G T C A G C T C T G A C T A G A C T G
p-value:1e-24
log p-value:-5.737e+01
Information Content per bp:1.928
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.5 +/- 49.6bp
Average Position of motif in Background113.7 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.70
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCTAGACAAGAG
TCTAGACA----
 A G T C A G T C A G C T C T G A A C T G C G T A A T G C C G T A C G T A C T A G C G T A A C T G
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCTAGACAAGAG
-BCAGACWA---
 A G T C A G T C A G C T C T G A A C T G C G T A A T G C C G T A C G T A C T A G C G T A A C T G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

GATA6/MA1104.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTAGACAAGAG-
AAAAGATAAGAAA
 A G T C A G T C A G C T C T G A A C T G C G T A A T G C C G T A C G T A C T A G C G T A A C T G A C G T
C G T A C G T A T C G A G C T A T C A G C T G A C G A T C G T A C G T A T A C G T C G A C G T A C G T A

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCTAGACAAGAG-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T C T G A A C T G C G T A A T G C C G T A C G T A C T A G C G T A A C T G A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCTAGACAAGAG
CGTCTAGACA----
 A C G T A C G T A G T C A G T C A G C T C T G A A C T G C G T A A T G C C G T A C G T A C T A G C G T A A C T G
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTAGACAAGAG----
--AAGATAAGATAACA
 A G T C A G T C A G C T C T G A A C T G C G T A A T G C C G T A C G T A C T A G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTAGACAAGAG
-NVAGATAAGR-
 A G T C A G T C A G C T C T G A A C T G C G T A A T G C C G T A C G T A C T A G C G T A A C T G
A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTAGACAAGAG---
CTCACACAATGGCGC
 A G T C A G T C A G C T C T G A A C T G C G T A A T G C C G T A C G T A C T A G C G T A A C T G A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCTAGACAAGAG-
---AGATAAGANN
 A G T C A G T C A G C T C T G A A C T G C G T A A T G C C G T A C G T A C T A G C G T A A C T G A C G T
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C

SOX15/MA1152.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTAGACAAGAG
--AAAACAATAG
 A G T C A G T C A G C T C T G A A C T G C G T A A T G C C G T A C G T A C T A G C G T A A C T G
A C G T A C G T C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G