Information for 13-GACCAGYT (Motif 25)

A T C G C G T A A T G C A G T C T G C A A C T G A G C T A C G T
Reverse Opposite:
C G T A C T G A A G T C A C G T A C T G A T C G A C G T A T G C
p-value:1e-13
log p-value:-3.068e+01
Information Content per bp:1.851
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif5.63%
Number of Background Sequences with motif354.1
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets86.4 +/- 44.5bp
Average Position of motif in Background101.9 +/- 71.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2/MA1105.1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GACCAGYT---
GACAAACCAGTTTTT
 A C G T A C G T A C G T A C G T A T C G C G T A A T G C A G T C T G C A A C T G A G C T A C G T A C G T A C G T A C G T
C T A G G T C A T G A C G C T A C T G A C G T A T A G C G T A C C G T A A T C G G A C T G A C T G A C T C A G T C A G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GACCAGYT--
BRRCVGTTDN
 A T C G C G T A A T G C A G T C T G C A A C T G A G C T A C G T A C G T A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GACCAGYT--
CAGCAGCTGN
 A T C G C G T A A T G C A G T C T G C A A C T G A G C T A C G T A C G T A C G T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

TFCP2/MA0145.3/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GACCAGYT-
AAACCGGTTT
 A C G T A T C G C G T A A T G C A G T C T G C A A C T G A G C T A C G T A C G T
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GACCAGYT--
NAHCAGCTGD
 A T C G C G T A A T G C A G T C T G C A A C T G A G C T A C G T A C G T A C G T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GACCAGYT-
-ANCAGCTG
 A T C G C G T A A T G C A G T C T G C A A C T G A G C T A C G T A C G T
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

TFAP4/MA0691.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GACCAGYT---
-AACAGCTGAT
 A T C G C G T A A T G C A G T C T G C A A C T G A G C T A C G T A C G T A C G T A C G T
A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GACCAGYT----
--CCAGCTGTTN
 A T C G C G T A A T G C A G T C T G C A A C T G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

GRHL1/MA0647.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GACCAGYT--
NAAACCGGTTTT
 A C G T A C G T A T C G C G T A A T G C A G T C T G C A A C T G A G C T A C G T A C G T A C G T
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GACCAGYT--
NAMCAGCTGK
 A T C G C G T A A T G C A G T C T G C A A C T G A G C T A C G T A C G T A C G T
C T A G T C G A T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G