Information for 11-TGGAGCGCTT (Motif 12)

A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G A T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A C T G A G T C A C G T A G T C A G T C C G T A
p-value:1e-17
log p-value:-4.094e+01
Information Content per bp:1.971
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.2 +/- 46.4bp
Average Position of motif in Background148.1 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGAGCGCTT
CGGAGC----
 A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G A T A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGCGCTT----
NTCGCGCGCCTTNNN
 A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGGAGCGCTT
GRTGMTRGAGCC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G A T A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGCGCTT
CTTGAGTGGCT
 A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G A T A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGAGCGCTT
TTGAGTGSTT
 A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G A T A C G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGAGCGCTT----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGAGCGCTT
BTBRAGTGSN-
 A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G A T A C G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGGAGCGCTT-
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G A T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PH0116.1_Nkx2-9/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGGAGCGCTT----
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGCGCTT
CTYRAGTGSY-
 A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G A T A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T