Information for 13-AGAGCAGTTT (Motif 16)

C G T A T C A G C G T A C T A G G T A C G T C A A C T G C G A T A C G T G A C T
Reverse Opposite:
C T G A G T C A G C T A A G T C A C G T C A T G A G T C C G A T A G T C C G A T
p-value:1e-14
log p-value:-3.414e+01
Information Content per bp:1.860
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif7.39%
Number of Background Sequences with motif633.2
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets89.7 +/- 60.2bp
Average Position of motif in Background99.4 +/- 70.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGAGCAGTTT-
-BRRCVGTTDN
 C G T A T C A G C G T A C T A G G T A C G T C A A C T G C G A T A C G T G A C T A C G T
A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

GRHL2/MA1105.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGAGCAGTTT--
GACAAACCAGTTTTT
 A C G T A C G T A C G T C G T A T C A G C G T A C T A G G T A C G T C A A C T G C G A T A C G T G A C T A C G T A C G T
C T A G G T C A T G A C G C T A C T G A C G T A T A G C G T A C C G T A A T C G G A C T G A C T G A C T C A G T C A G T

MSC/MA0665.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAGCAGTTT
AACAGCTGTT-
 A C G T C G T A T C A G C G T A C T A G G T A C G T C A A C T G C G A T A C G T G A C T
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGAGCAGTTT---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T C G T A T C A G C G T A C T A G G T A C G T C A A C T G C G A T A C G T G A C T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Tcf21/MA0832.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGAGCAGTTT-
NCAACAGCTGTTGC
 A C G T A C G T A C G T C G T A T C A G C G T A C T A G G T A C G T C A A C T G C G A T A C G T G A C T A C G T
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

MYB/MA0100.3/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGAGCAGTTT--
--NNCAGTTGNN
 C G T A T C A G C G T A C T A G G T A C G T C A A C T G C G A T A C G T G A C T A C G T A C G T
A C G T A C G T C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGAGCAGTTT-
-TGGCAGTTGG
 C G T A T C A G C G T A C T A G G T A C G T C A A C T G C G A T A C G T G A C T A C G T
A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

MYF6/MA0667.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGAGCAGTTT
AACAGCTGTT-
 A C G T C G T A T C A G C G T A C T A G G T A C G T C A A C T G C G A T A C G T G A C T
T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGAGCAGTTT-
NAAACCGGTTTT
 A C G T C G T A T C A G C G T A C T A G G T A C G T C A A C T G C G A T A C G T G A C T A C G T
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGAGCAGTTT----
NNNTGGCAGTTGGTNN
 A C G T A C G T C G T A T C A G C G T A C T A G G T A C G T C A A C T G C G A T A C G T G A C T A C G T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G