Information for 12-GTACTTTG (Motif 19)

A C T G A C G T C G T A A G T C A C G T A G C T A C G T A C T G
Reverse Opposite:
A G T C C G T A C T G A C G T A A C T G A C G T C G T A A G T C
p-value:1e-9
log p-value:-2.160e+01
Information Content per bp:1.972
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif4.39%
Number of Background Sequences with motif361.2
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets103.6 +/- 54.2bp
Average Position of motif in Background97.4 +/- 65.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.91
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.77
Offset:-7
Orientation:forward strand
Alignment:-------GTACTTTG--
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G C T A C G T A C T G A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GTACTTTG-------
TGGACTTTGNNCTNTG
 A C G T A C T G A C G T C G T A A G T C A C G T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GTACTTTG------
TGGACTTTGNNCTCN
 A C G T A C T G A C G T C G T A A G T C A C G T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------GTACTTTG--
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G C T A C G T A C T G A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTACTTTG-----
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GTACTTTG---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G C T A C G T A C T G A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

SOX10/MA0442.2/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTACTTTG----
-NNCTTTGTTNN
 A C T G A C G T C G T A A G T C A C G T A G C T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GTACTTTG--
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G C T A C G T A C T G A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTACTTTG-------
NNTTCCTTTGATCTANA
 A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PH0112.1_Nkx2-3/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GTACTTTG--
CTTTAAGTACTTAATG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G C T A C G T A C T G A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G