Information for 9-ACAGAGTTGAAC (Motif 3)

G C T A A G T C C T G A A C T G C G T A A C T G A G C T A C G T C A T G C G T A C G T A A G T C
Reverse Opposite:
C T A G A C G T A C G T G T A C G T C A C T G A T A G C C G A T A G T C A G C T A C T G C G A T
p-value:1e-30
log p-value:-6.976e+01
Information Content per bp:1.901
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.99%
Number of Background Sequences with motif24.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets92.0 +/- 50.6bp
Average Position of motif in Background96.2 +/- 53.7bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:ACAGAGTTGAAC---
-------TGAACTCA
 G C T A A G T C C T G A A C T G C G T A A C T G A G C T A C G T C A T G C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:ACAGAGTTGAAC----
------TTGAMCTTTG
 G C T A A G T C C T G A A C T G C G T A A C T G A G C T A C G T C A T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----ACAGAGTTGAAC
NMMNBAAAGGGTTAA--
 A C G T A C G T A C G T A C G T A C G T G C T A A G T C C T G A A C T G C G T A A C T G A G C T A C G T C A T G C G T A C G T A A G T C
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACAGAGTTGAAC
RHHCAGAGAGGB--
 A C G T A C G T G C T A A G T C C T G A A C T G C G T A A C T G A G C T A C G T C A T G C G T A C G T A A G T C
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAGTTGAAC
CACAGN-------
 A C G T G C T A A G T C C T G A A C T G C G T A A C T G A G C T A C G T C A T G C G T A C G T A A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MYBL2/MA0777.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ACAGAGTTGAAC----
-GACNGTTTAACGGTT
 G C T A A G T C C T G A A C T G C G T A A C T G A G C T A C G T C A T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

MYB/MA0100.3/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:ACAGAGTTGAAC
-NNCAGTTGNN-
 G C T A A G T C C T G A A C T G C G T A A C T G A G C T A C G T C A T G C G T A C G T A A G T C
A C G T C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ACAGAGTTGAAC-
----ATTTGAATT
 G C T A A G T C C T G A A C T G C G T A A C T G A G C T A C G T C A T G C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:ACAGAGTTGAAC-------
--NNANTTGACCCCTNNNN
 G C T A A G T C C T G A A C T G C G T A A C T G A G C T A C G T C A T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----ACAGAGTTGAAC---
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T A C G T A C G T G C T A A G T C C T G A A C T G C G T A A C T G A G C T A C G T C A T G C G T A C G T A A G T C A C G T A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A