Information for 10-GAAAGGAAAGGA (Motif 4)

T C A G T C G A C T G A G C T A C A T G C T A G C T G A C G T A C T G A C A T G C T A G T C G A
Reverse Opposite:
A G C T G A T C G T A C G A C T G C A T G A C T G A T C G T A C C G A T A G C T A G C T A G T C
p-value:1e-29
log p-value:-6.754e+01
Information Content per bp:1.725
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif17.56%
Number of Background Sequences with motif1826.1
Percentage of Background Sequences with motif4.15%
Average Position of motif in Targets89.0 +/- 52.7bp
Average Position of motif in Background103.0 +/- 95.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGGAAAGGA
AGAAACGAAAGT-
 A C G T T C A G T C G A C T G A G C T A C A T G C T A G C T G A C G T A C T G A C A T G C T A G T C G A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGAAAGGA
CGGAAGTGAAAC--
 A C G T A C G T T C A G T C G A C T G A G C T A C A T G C T A G C T G A C G T A C T G A C A T G C T A G T C G A
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGAAAGGA
GGAAGTGAAAST-
 A C G T T C A G T C G A C T G A G C T A C A T G C T A G C T G A C G T A C T G A C A T G C T A G T C G A
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGAAAGGA
GAGAACCGAAACTG
 A C G T A C G T T C A G T C G A C T G A G C T A C A T G C T A G C T G A C G T A C T G A C A T G C T A G T C G A
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGAAAGGA
GRAASTGAAAST-
 A C G T T C A G T C G A C T G A G C T A C A T G C T A G C T G A C G T A C T G A C A T G C T A G T C G A
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGAAAGGA
GGYAATGAAA---
 A C G T T C A G T C G A C T G A G C T A C A T G C T A G C T G A C G T A C T G A C A T G C T A G T C G A
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGGAAAGGA
GAAAMTGAAACT-
 A C G T T C A G T C G A C T G A G C T A C A T G C T A G C T G A C G T A C T G A C A T G C T A G T C G A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAAAGGAAAGGA
NACAGGAAAT--
 T C A G T C G A C T G A G C T A C A T G C T A G C T G A C G T A C T G A C A T G C T A G T C G A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGAAAGGA
GAAASYGAAASY-
 A C G T T C A G T C G A C T G A G C T A C A T G C T A G C T G A C G T A C T G A C A T G C T A G T C G A
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGGAAAGGA
GAAAGTGAAAGT-
 A C G T T C A G T C G A C T G A G C T A C A T G C T A G C T G A C G T A C T G A C A T G C T A G T C G A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T