Information for 12-GTACAGTATATA (Motif 6)

C T A G G A C T T G C A T G A C C T G A A T C G A G C T C T G A C G A T C T G A A G C T C G T A
Reverse Opposite:
G A C T C T G A A G C T C G T A A G C T C T G A A T G C A G C T A C T G A C G T C G T A G A T C
p-value:1e-28
log p-value:-6.553e+01
Information Content per bp:1.906
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.2 +/- 50.6bp
Average Position of motif in Background73.9 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GTACAGTATATA--------
-----GTATAAAAGGCGGGG
 C T A G G A C T T G C A T G A C C T G A A T C G A G C T C T G A C G A T C T G A A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GTACAGTATATA--------
-----GTATAAAAGGCGGGG
 C T A G G A C T T G C A T G A C C T G A A T C G A G C T C T G A C G A T C T G A A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

NR3C1/MA0113.3/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTACAGTATATA---
GGGTACATAATGTTCCC
 A C G T A C G T C T A G G A C T T G C A T G A C C T G A A T C G A G C T C T G A C G A T C T G A A G C T C G T A A C G T A C G T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

PB0163.1_Six6_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTACAGTATATA------
-ANNNGGATATATCCNNN
 C T A G G A C T T G C A T G A C C T G A A T C G A G C T C T G A C G A T C T G A A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTACAGTATATA------
--TCTTTATATATAAATA
 C T A G G A C T T G C A T G A C C T G A A T C G A G C T C T G A C G A T C T G A A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTACAGTATATA---
GGGAACACAATGTTCCC
 A C G T A C G T C T A G G A C T T G C A T G A C C T G A A T C G A G C T C T G A C G A T C T G A A G C T C G T A A C G T A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTACAGTATATA---
GAACADWATGTTCTT
 C T A G G A C T T G C A T G A C C T G A A T C G A G C T C T G A C G A T C T G A A G C T C G T A A C G T A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTACAGTATATA---
GRACAGWMTGTYCTB
 C T A G G A C T T G C A T G A C C T G A A T C G A G C T C T G A C G A T C T G A A G C T C G T A A C G T A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTACAGTATATA--
ATGTACAGTAGCAAAG
 A C G T A C G T C T A G G A C T T G C A T G A C C T G A A T C G A G C T C T G A C G A T C T G A A G C T C G T A A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTACAGTATATA---
GVACAGNMTGTYCTB
 C T A G G A C T T G C A T G A C C T G A A T C G A G C T C T G A C G A T C T G A A G C T C G T A A C G T A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G