Information for 16-AAACTAGACAGA (Motif 9)

G T C A C G T A C G T A A T G C A G C T C G T A A T C G C G T A T A G C C T G A C T A G C G T A
Reverse Opposite:
A C G T A G T C A G C T A T C G A C G T T A G C A C G T C T G A T A C G C G A T A C G T A C G T
p-value:1e-21
log p-value:-4.960e+01
Information Content per bp:1.868
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.59%
Number of Background Sequences with motif44.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets100.2 +/- 65.8bp
Average Position of motif in Background118.2 +/- 67.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAACTAGACAGA
--TCTAGACA--
 G T C A C G T A C G T A A T G C A G C T C G T A A T C G C G T A T A G C C T G A C T A G C G T A
A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAACTAGACAGA---
CAAATCCAGACATCACA
 A C G T A C G T G T C A C G T A C G T A A T G C A G C T C G T A A T C G C G T A T A G C C T G A C T A G C G T A A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

FOXP2/MA0593.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAACTAGACAGA
-AAGTAAACAAA
 G T C A C G T A C G T A A T G C A G C T C G T A A T C G C G T A T A G C C T G A C T A G C G T A
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAACTAGACAGA
AAAGTAAACA--
 G T C A C G T A C G T A A T G C A G C T C G T A A T C G C G T A T A G C C T G A C T A G C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAACTAGACAGA
AAAGTAAACA--
 G T C A C G T A C G T A A T G C A G C T C G T A A T C G C G T A T A G C C T G A C T A G C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAACTAGACAGA----
AAAGTAAACAAAAATT
 G T C A C G T A C G T A A T G C A G C T C G T A A T C G C G T A T A G C C T G A C T A G C G T A A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAACTAGACAGA
---CCAGACAG-
 G T C A C G T A C G T A A T G C A G C T C G T A A T C G C G T A T A G C C T G A C T A G C G T A
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

FOXP1/MA0481.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAACTAGACAGA-
-AAGTAAACAGAA
 G T C A C G T A C G T A A T G C A G C T C G T A A T C G C G T A T A G C C T G A C T A G C G T A A C G T
A C G T T C G A C G T A C T A G G A C T T G C A G T C A C T G A G A T C C G T A T C A G C G T A G C T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAACTAGACAGA
-AAATAAACA--
 G T C A C G T A C G T A A T G C A G C T C G T A A T C G C G T A T A G C C T G A C T A G C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAACTAGACAGA---
AAAAAGTAAACAAACAC
 A C G T A C G T G T C A C G T A C G T A A T G C A G C T C G T A A T C G C G T A T A G C C T G A C T A G C G T A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C