Information for 20-CGGGAWTWCA (Motif 20)

A G T C A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C C G T A
Reverse Opposite:
C G A T C T A G C G T A G T C A C G T A A C G T G T A C A G T C A G T C A C T G
p-value:1e-22
log p-value:-5.227e+01
Information Content per bp:1.807
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif30.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets104.7 +/- 59.0bp
Average Position of motif in Background93.4 +/- 89.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CGGGAWTWCA
CWGGCGGGAA----
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T

TFDP1/MA1122.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CGGGAWTWCA
GGGCGGGAAGG--
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C C G T A
T A C G T A C G T A C G G A T C T A C G T A C G A T C G C T G A T G C A T A C G T A C G A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGGGAWTWCA
NGGGATTA--
 A G T C A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C C G T A
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

RELB/MA1117.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGGGAWTWCA
NNGGGGAATNC-
 A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C C G T A
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGGGAWTWCA
GGCGGGAARN--
 A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C C G T A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CGGGAWTWCA
BTKGGCGGGAAA---
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C C G T A
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGGGAWTWCA
GGCGGGAAAH--
 A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C C G T A
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGGGAWTWCA
GGGCGGGAAGG--
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C C G T A
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGGGAWTWCA---
-GGGATTGCATNN
 A G T C A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C C G T A A C G T A C G T A C G T
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGGGAWTWCA
TGGCGGGAAAHB-
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C C G T A
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T