Information for 17-GWGYACTT (Motif 23)

C T A G C G T A T A C G G A T C T C G A A T G C A C G T A G C T
Reverse Opposite:
T C G A G T C A T A C G A G C T C T A G A T G C G C A T G A T C
p-value:1e-12
log p-value:-2.774e+01
Information Content per bp:1.598
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif10.72%
Number of Background Sequences with motif1763.1
Percentage of Background Sequences with motif4.03%
Average Position of motif in Targets104.1 +/- 60.8bp
Average Position of motif in Background99.9 +/- 65.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GWGYACTT---
-ACCACTTGAA
 C T A G C G T A T A C G G A T C T C G A A T G C A C G T A G C T A C G T A C G T A C G T
A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GWGYACTT--
-ACCACTTAA
 C T A G C G T A T A C G G A T C T C G A A T G C A C G T A G C T A C G T A C G T
A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GWGYACTT---
--CCACTTGAA
 C T A G C G T A T A C G G A T C T C G A A T G C A C G T A G C T A C G T A C G T A C G T
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GWGYACTT--
--GCACTTAA
 C T A G C G T A T A C G G A T C T C G A A T G C A C G T A G C T A C G T A C G T
A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GWGYACTT--
AAGCACTTAA
 C T A G C G T A T A C G G A T C T C G A A T G C A C G T A G C T A C G T A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GWGYACTT--
-ACCACTTAA
 C T A G C G T A T A C G G A T C T C G A A T G C A C G T A G C T A C G T A C G T
A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GWGYACTT--
AASCACTCAA
 C T A G C G T A T A C G G A T C T C G A A T G C A C G T A G C T A C G T A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GWGYACTT------
CATAACCACTTAACAAC
 A C G T A C G T A C G T C T A G C G T A T A C G G A T C T C G A A T G C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GWGYACTT----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A T A C G G A T C T C G A A T G C A C G T A G C T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GWGYACTT---
-RSCACTYRAG
 C T A G C G T A T A C G G A T C T C G A A T G C A C G T A G C T A C G T A C G T A C G T
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G