Information for 21-CTCTCGHT (Motif 24)

A G T C A C G T A G T C A C G T A G T C C A T G G A C T A C G T
Reverse Opposite:
C G T A C T G A G T A C A C T G C G T A C T A G C G T A A C T G
p-value:1e-5
log p-value:-1.353e+01
Information Content per bp:1.837
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif15.52%
Number of Background Sequences with motif4157.8
Percentage of Background Sequences with motif9.51%
Average Position of motif in Targets89.0 +/- 55.5bp
Average Position of motif in Background101.1 +/- 80.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCGHT---
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C A T G G A C T A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----CTCTCGHT---
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C A T G G A C T A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTCTCGHT---
ACTTTCACTTTC
 A C G T A G T C A C G T A G T C A C G T A G T C C A T G G A C T A C G T A C G T A C G T A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTCTCGHT---
ACTTTCGTTTCT
 A C G T A G T C A C G T A G T C A C G T A G T C C A T G G A C T A C G T A C G T A C G T A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CTCTCGHT---
AGTATTCTCGGTTGC
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C A T G G A C T A C G T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCGHT---
ASTTTCASTTYC
 A C G T A G T C A C G T A G T C A C G T A G T C C A T G G A C T A C G T A C G T A C G T A C G T
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

PRDM1/MA0508.2/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTCTCGHT
TCACTTTCAC-
 A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C A T G G A C T A C G T
G C A T G A T C T C G A G A T C C A G T C G A T G C A T T G A C G C T A G A T C A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCGHT---
RSTTTCRSTTTC
 A C G T A G T C A C G T A G T C A C G T A G T C C A T G G A C T A C G T A C G T A C G T A C G T
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

PB0035.1_Irf5_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCGHT----
NTGGTTTCGGTTNNN
 A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C A T G G A C T A C G T A C G T A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CTCTCGHT----
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C A T G G A C T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C