Information for 10-TGAATGCACACA (Motif 4)

A G C T A C T G C G T A G T C A A C G T C T A G A G T C C G T A G T A C C G T A A G T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A G T C C T G A
p-value:1e-71
log p-value:-1.650e+02
Information Content per bp:1.862
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif7.20%
Number of Background Sequences with motif33.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets109.3 +/- 55.2bp
Average Position of motif in Background94.8 +/- 76.9bp
Strand Bias (log2 ratio + to - strand density)-2.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGAATGCACACA-----
-AGCGGCACACACGCAA
 A G C T A C T G C G T A G T C A A C G T C T A G A G T C C G T A G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGAATGCACACA-----
-CGAAGCACACAAAATA
 A G C T A C T G C G T A G T C A A C G T C T A G A G T C C G T A G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGAATGCACACA
TCCAATCCACA--
 A C G T A G C T A C T G C G T A G T C A A C G T C T A G A G T C C G T A G T A C C G T A A G T C C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGAATGCACACA
--AAAGTAAACA
 A G C T A C T G C G T A G T C A A C G T C T A G A G T C C G T A G T A C C G T A A G T C C G T A
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGAATGCACACA
SSAATCCACANN
 A G C T A C T G C G T A G T C A A C G T C T A G A G T C C G T A G T A C C G T A A G T C C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGAATGCACACA
--AAAGTAAACA
 A G C T A C T G C G T A G T C A A C G T C T A G A G T C C G T A G T A C C G T A A G T C C G T A
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGAATGCACACA
--WAAGTAAAYA
 A G C T A C T G C G T A G T C A A C G T C T A G A G T C C G T A G T A C C G T A A G T C C G T A
A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGAATGCACACA--
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A G C T A C T G C G T A G T C A A C G T C T A G A G T C C G T A G T A C C G T A A G T C C G T A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

POU5F1/MA1115.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGAATGCACACA
-ATATGCAAATT
 A G C T A C T G C G T A G T C A A C G T C T A G A G T C C G T A G T A C C G T A A G T C C G T A
A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGAATGCACACA-----
AAAATGTAAACAAACAG
 A G C T A C T G C G T A G T C A A C G T C T A G A G T C C G T A G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G