Information for 11-CGTTGGAAACGG (Motif 5)

A T G C A T C G A C G T A C G T A C T G A T C G G T C A C G T A C T G A A G T C A C T G A C T G
Reverse Opposite:
A G T C G T A C A C T G A G C T A C G T A C G T A T G C A G T C G T C A G T C A A T G C A T C G
p-value:1e-66
log p-value:-1.542e+02
Information Content per bp:1.821
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.16%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.8 +/- 53.8bp
Average Position of motif in Background180.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)4.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CENPB/MA0637.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGTTGGAAACGG-
TTCGTNNNANGCGGG
 A C G T A C G T A T G C A T C G A C G T A C G T A C T G A T C G G T C A C G T A C T G A A G T C A C T G A C T G A C G T
C A G T C G A T A G T C C A T G A G C T C G A T A T C G A C G T C T G A G C A T T C A G T G A C C T A G C T A G C T A G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGTTGGAAACGG
CSTGGGAAAD--
 A T G C A T C G A C G T A C G T A C T G A T C G G T C A C G T A C T G A A G T C A C T G A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGTTGGAAACGG
CCTGGGAAAG--
 A T G C A T C G A C G T A C G T A C T G A T C G G T C A C G T A C T G A A G T C A C T G A C T G
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGTTGGAAACGG
---TGGAAAA--
 A T G C A T C G A C G T A C G T A C T G A T C G G T C A C G T A C T G A A G T C A C T G A C T G
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CGTTGGAAACGG---
-----NHAACBGYYV
 A T G C A T C G A C G T A C G T A C T G A T C G G T C A C G T A C T G A A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGTTGGAAACGG
-NNTGGAAANN-
 A T G C A T C G A C G T A C G T A C T G A T C G G T C A C G T A C T G A A G T C A C T G A C T G
A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGTTGGAAACGG
-CTTGGCAA---
 A T G C A T C G A C G T A C G T A C T G A T C G G T C A C G T A C T G A A G T C A C T G A C T G
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGTTGGAAACGG---
CTACTTGGATACGGAAT
 A C G T A C G T A T G C A T C G A C G T A C G T A C T G A T C G G T C A C G T A C T G A A G T C A C T G A C T G A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGTTGGAAACGG
VGCTGGCA----
 A T G C A T C G A C G T A C G T A C T G A T C G G T C A C G T A C T G A A G T C A C T G A C T G
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGTTGGAAACGG
-AATGGAAAAT-
 A T G C A T C G A C G T A C G T A C T G A T C G G T C A C G T A C T G A A G T C A C T G A C T G
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T