Information for 13-TGAAACACTCTT (Motif 7)

A C G T A C T G C G T A C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T A G T C C G T A
p-value:1e-61
log p-value:-1.424e+02
Information Content per bp:1.975
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif4.32%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.4 +/- 49.1bp
Average Position of motif in Background72.3 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)3.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six3/MA0631.1/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACACTCTT
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACACTCTT
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGAAACACTCTT
ACTGAAACCA----
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACACTCTT
ANANGTGATACCCCATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACACTCTT
ANANNTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGAAACACTCTT--
TWGHWACAWTGTWDC
 A C G T A C G T A C T G C G T A C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACACTCTT
AATNTTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACACTCTT
ANNNATGATACCCCATC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PB0059.1_Six6_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACACTCTT
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGAAACACTCTT
--NAACAAT---
 A C G T A C T G C G T A C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T