Information for 14-TAAMMACTAGAC (Motif 11)

A C G T C G T A C G T A G T C A G T C A C G T A A G T C A G C T C G T A A T C G C G T A A G T C
Reverse Opposite:
A C T G A C G T A T G C A C G T C T G A A C T G A C G T A C G T A C G T A C G T A C G T C G T A
p-value:1e-46
log p-value:-1.073e+02
Information Content per bp:1.923
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets105.6 +/- 53.1bp
Average Position of motif in Background71.5 +/- 42.4bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TAAMMACTAGAC-
-----TCTAGACA
 A C G T C G T A C G T A G T C A G T C A C G T A A G T C A G C T C G T A A T C G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAAMMACTAGAC------
-CAAATCCAGACATCACA
 A C G T C G T A C G T A G T C A G T C A C G T A A G T C A G C T C G T A A T C G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAAMMACTAGAC----
ATAACCACTTGAAAATT
 A C G T A C G T C G T A C G T A G T C A G T C A C G T A A G T C A G C T C G T A A T C G C G T A A G T C A C G T A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PB0172.1_Sox1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TAAMMACTAGAC
NNNTAACAATTATAN
 A C G T A C G T A C G T A C G T C G T A C G T A G T C A G T C A C G T A A G T C A G C T C G T A A T C G C G T A A G T C
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TAAMMACTAGAC--
------CCAGACAG
 A C G T C G T A C G T A G T C A G T C A C G T A A G T C A G C T C G T A A T C G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TAAMMACTAGAC
AATAAACAATN---
 A C G T A C G T A C G T C G T A C G T A G T C A G T C A C G T A A G T C A G C T C G T A A T C G C G T A A G T C
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TAAMMACTAGAC----
------CCAGACRSVB
 A C G T C G T A C G T A G T C A G T C A C G T A A G T C A G C T C G T A A T C G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

FOXL1/MA0033.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAAMMACTAGAC
GTAAACA------
 A C G T A C G T C G T A C G T A G T C A G T C A C G T A A G T C A G C T C G T A A T C G C G T A A G T C
C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TAAMMACTAGAC
ATGTCACAACAACAC
 A C G T A C G T A C G T A C G T C G T A C G T A G T C A G T C A C G T A A G T C A G C T C G T A A T C G C G T A A G T C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAAMMACTAGAC---
TAAGCCACTTGAAATT
 A C G T A C G T C G T A C G T A G T C A G T C A C G T A A G T C A G C T C G T A A T C G C G T A A G T C A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T