Information for 18-GAGGCCTTCG (Motif 16)

A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A A C T G A C T G A T G C A G T C A C G T G T A C
p-value:1e-21
log p-value:-4.932e+01
Information Content per bp:1.956
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets112.0 +/- 59.1bp
Average Position of motif in Background143.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCCTTCG
CNAGGCCT---
 A C G T A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C G T A G T C A C T G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCCTTCG
CTAGGCCT---
 A C G T A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C G T A G T C A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GAGGCCTTCG
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C G T A G T C A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGGCCTTCG
HAWGRGGCCM---
 A C G T A C G T A C G T A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C G T A G T C A C T G
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAGGCCTTCG
----GCTTCC
 A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C G T A G T C A C T G
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGGCCTTCG-
-TGACCTTGAN
 A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C G T A G T C A C T G A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

PROX1/MA0794.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGGCCTTCG
CAAGACGCCTTA-
 A C G T A C G T A C G T A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C G T A G T C A C T G
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCCTTCG
BNTGDCCTTG-
 A C G T A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C G T A G T C A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGGCCTTCG--
GTGACCTTGRVN
 A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGGCCTTCG
GTGACCTT--
 A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C G T A G T C A C T G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T