Information for 20-GCCTATGGTG (Motif 18)

A C T G A T G C A G T C A C G T C T G A A C G T A C T G C T A G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C A G T C C G T A A G C T C G T A A C T G A T C G A G T C
p-value:1e-16
log p-value:-3.849e+01
Information Content per bp:1.938
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif23.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets78.0 +/- 48.6bp
Average Position of motif in Background85.9 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE22/MA0818.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCTATGGTG
ANCATATGGT-
 A C G T A C T G A T G C A G T C A C G T C T G A A C G T A C T G C T A G A C G T A C T G
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCTATGGTG
ANCATATGGT-
 A C G T A C T G A T G C A G T C A C G T C T G A A C G T A C T G C T A G A C G T A C T G
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCTATGGTG
ACCATATGGT-
 A C G T A C T G A T G C A G T C A C G T C T G A A C G T A C T G C T A G A C G T A C T G
C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCTATGGTG
AACATATGTT-
 A C G T A C T G A T G C A G T C A C G T C T G A A C G T A C T G C T A G A C G T A C T G
C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCTATGGTG
ACCATATGGC-
 A C G T A C T G A T G C A G T C A C G T C T G A A C G T A C T G C T A G A C G T A C T G
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCTATGGTG-
-GCTGTGGTTT
 A C T G A T G C A G T C A C G T C T G A A C G T A C T G C T A G A C G T A C T G A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCTATGGTG
ANCATATGTT-
 A C G T A C T G A T G C A G T C A C G T C T G A A C G T A C T G C T A G A C G T A C T G
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCTATGGTG
ACCATATGGT-
 A C G T A C T G A T G C A G T C A C G T C T G A A C G T A C T G C T A G A C G T A C T G
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCTATGGTG--
NNHTGTGGTTWN
 A C T G A T G C A G T C A C G T C T G A A C G T A C T G C T A G A C G T A C T G A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

BHLHE23/MA0817.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCTATGGTG
NAACATATGTTT
 A C G T A C G T A C T G A T G C A G T C A C G T C T G A A C G T A C T G C T A G A C G T A C T G
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T