Information for 21-TCTVTGCGAT (Motif 19)

A C G T A G T C C G A T T G C A A C G T A C T G A G T C A C T G G C T A G A C T
Reverse Opposite:
C G T A C A G T A G T C A C T G G T A C G T C A A C G T C G T A C T A G C G T A
p-value:1e-13
log p-value:-3.208e+01
Information Content per bp:1.758
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets110.0 +/- 59.4bp
Average Position of motif in Background43.6 +/- 41.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCTVTGCGAT--
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A G T C C G A T T G C A A C G T A C T G A G T C A C T G G C T A G A C T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

CUX2/MA0755.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCTVTGCGAT--
--TAATCGATAA
 A C G T A G T C C G A T T G C A A C G T A C T G A G T C A C T G G C T A G A C T A C G T A C G T
A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TCTVTGCGAT-
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T T G C A A C G T A C T G A G T C A C T G G C T A G A C T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCTVTGCGAT
AAATCACTGC---
 A C G T A C G T A C G T A C G T A G T C C G A T T G C A A C G T A C T G A G T C A C T G G C T A G A C T
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCTVTGCGAT--
--TAATCGATAA
 A C G T A G T C C G A T T G C A A C G T A C T G A G T C A C T G G C T A G A C T A C G T A C G T
A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCTVTGCGAT--
--TTTGCGGTTT
 A C G T A G T C C G A T T G C A A C G T A C T G A G T C A C T G G C T A G A C T A C G T A C G T
A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCTVTGCGAT------
TATTATGGGATGGATAA
 A C G T A C G T A G T C C G A T T G C A A C G T A C T G A G T C A C T G G C T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PB0179.1_Sp100_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TCTVTGCGAT---
NNTTTANNCGACGNA
 A C G T A C G T A C G T A G T C C G A T T G C A A C G T A C T G A G T C A C T G G C T A G A C T A C G T A C G T A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TCTVTGCGAT---
-AGATGCAATCCC
 A C G T A G T C C G A T T G C A A C G T A C T G A G T C A C T G G C T A G A C T A C G T A C G T A C G T
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TCTVTGCGAT-
NTTTTACGACT
 A C G T A G T C C G A T T G C A A C G T A C T G A G T C A C T G G C T A G A C T A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T