Information for 16-AACACTCT (Motif 20)

C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C G T
p-value:1e-13
log p-value:-3.171e+01
Information Content per bp:1.963
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.54%
Number of Background Sequences with motif351.2
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets104.4 +/- 59.2bp
Average Position of motif in Background99.9 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AACACTCT-
MRSCACTYAA
 A C G T C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

KLF4/MA0039.3/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AACACTCT--
CCACACCCTGC
 A C G T C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T
T G A C T G A C T C G A G T A C C T G A A G T C T G A C G A T C G C A T A T C G G A T C

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AACACTCT
NAACAAT--
 A C G T C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AACACTCT-
AASCACTCAA
 A C G T C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AACACTCT
AACAAT--
 C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AACACTCT--
RSCACTYRAG
 C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AACACTCT-
AAGCACTTAA
 A C G T C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AACACTCT--
AGCCACTCAAG
 A C G T C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AACACTCT-----
TTAACCCTTTVNKKN
 A C G T A C G T C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AACACTCT--
NSCACTYVAV
 C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G