Information for 6-CTTGACAACG (Motif 14)

A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C T G
p-value:1e-3
log p-value:-7.770e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 0.0bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTTGACAACG
-TTGACAGG-
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G T C A C T G
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTTGACAACG
-TTGACAG--
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G T C A C T G
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTTGACAACG
-TTGACAGC-
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G T C A C T G
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTTGACAACG
-YTGWCADY-
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G T C A C T G
A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTTGACAACG
CTTGGCAA--
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G T C A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTTGACAACG
TACTTGGCAGA-
 A C G T A C G T A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G T C A C T G
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTTGACAACG--
TACCATAGCAACGGT
 A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G T C A C T G A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTGACAACG
ARNTGACA---
 A C G T A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G T C A C T G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTTGACAACG--
CCGCATAGCAACGGA
 A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G T C A C T G A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx1/MA0509.1/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTTGACAACG
GTTGCCATGGCAAC-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G T C A C T G
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T